Comparative Biochemistry and Physiology Part D: Genomics and Proteomics This is an RSS file. You can use it to subscribe to this data in your favourite RSS reader or to display this data on your own website or blog.

Identification and expression analysis of odorant binding proteins and chemosensory proteins from dissected antennae and mouthparts of the rice bug Leptocorisa acuta
Publication date: Available online 1 November 2019Source: Comparative Biochemistry and Physiology Part D: Genomics and ProteomicsAuthor(s): Meng-Qiu Qu, Yang Cui, Yan Zou, Zhong-Zhen Wu, Jin-Tian LinAbstractThe rice bug, Leptocorisa acuta (Tunberg) (Hemiptera: Alydidae), is a notorious pest in Asia, and it is significantly attracted by the volatiles derived from host plants. However, it remains unknown how L. acuta recognizes host volatile compounds at the molecular level. Odorant-binding proteins (OBPs) and chemosensory proteins (CSPs) are thought to be responsible for the initial biochemical recognition during olfactory ...
Source: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics - November 1, 2019 Category: Genetics & Stem Cells Source Type: research

Toxicity of the aquatic herbicide, reward®, on the fathead minnow with pulsed-exposure proteomic profile
The objectives of this study were to assess the lethal and sub-lethal effects of the aquatic herbicide commercial formulation, Reward® (373 g/L DB), using application scenarios prescribed by the manufacturer. Specifically, a 14 d period between applications of Reward® in a water body undergoing treatment is required, yet the effects of these ‘pulse’ exposure scenarios on aquatic wildlife such as fish are unknown. In the first experiment early life stage FHM were exposed to a continuous DB concentrations from 0.105–12.6 mg/L which yielded a larval 7 d LC50 of 2.04 mg/L as well as a significant decrease in body...
Source: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics - November 1, 2019 Category: Genetics & Stem Cells Source Type: research

Transcriptome-level effects of the model organic pollutant phenanthrene and its solvent acetone in three amphipod species
Publication date: Available online 31 October 2019Source: Comparative Biochemistry and Physiology Part D: Genomics and ProteomicsAuthor(s): Zhanna Shatilina, Polina Drozdova, Daria Bedulina, Lorena Rivarola-Duarte, Stephan Schreiber, Christian Otto, Frank Jühling, Silke Aulhorn, Wibke Busch, Yulia Lubyaga, Elizaveta Kondrateva, Tamara Pobezhimova, Lena Jakob, Magnus Lucassen, Franz J. Sartoris, Jörg Hackermüller, Hans-Otto Pörtner, Peter F. Stadler, Till Luckenbach, Maxim TimofeyevAbstractPolyaromatic hydrocarbons (PAH) are common pollutants of water ecosystems originating from incineration processes and contamination ...
Source: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics - November 1, 2019 Category: Genetics & Stem Cells Source Type: research

Potential regulation by miRNAs on glucose metabolism in liver of common carp (Cyprinus carpio) at different temperatures
Publication date: Available online 19 October 2019Source: Comparative Biochemistry and Physiology Part D: Genomics and ProteomicsAuthor(s): JunLong Sun, Qiao Liu, LiuLan Zhao, Can Cui, Hao Wu, Lei Liao, Gang Tang, ShiYong Yang, Song YangAbstractWater temperature can affect the metabolism of fish. Common carp (Cyprinus carpio) is a representative eurythermic fish that can survive at a wide range of ambient temperatures, allowing it to live in an extensive geographical range. The goal of this work was to study the glucose metabolism of common carp at different temperatures and determine the miRNAs involved in the regulation ...
Source: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics - October 20, 2019 Category: Genetics & Stem Cells Source Type: research

Quantitative proteomics analysis of membrane glucocorticoid receptor activation in rainbow trout skeletal muscle
Publication date: Available online 19 October 2019Source: Comparative Biochemistry and Physiology Part D: Genomics and ProteomicsAuthor(s): Jorge E. Aedo, Marcia Fuentes-Valenzuela, Alfredo Molina, Juan A. ValdésAbstractCortisol modulates energy metabolism promoting the mobilization of glucose and increasing proteolysis to overcome stressful situations in teleost. The cortisol metabolic effects are attributed to genomic mechanisms that involve the interaction of cortisol with its glucocorticoid intracellular receptor. Furthermore, cortisol can also interact with plasma membrane glucocorticoid receptors activating a rapid ...
Source: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics - October 20, 2019 Category: Genetics & Stem Cells Source Type: research

Comparative transcriptome analysis of Triplophysa yarkandensis in response to salinity and alkalinity stress
Publication date: Available online 19 October 2019Source: Comparative Biochemistry and Physiology Part D: Genomics and ProteomicsAuthor(s): Sheng-Ao Chen, Jilun Hou, Na Yao, Congxin Xie, Dapeng LiAbstractTriplophysa yarkandensis, a fish belonging to the family Nemacheilidae, is distributed in the Tarim River, China, immediately north of the Qinghai-Tibet Plateau. Due to increasing salinity and alkalinity in the Tarim River, the habitats of T. yarkandensis have been seriously altered. To identify the genes and pathways that are important for responding to salinity and alkalinity stress, the gill transcriptomes of fish livin...
Source: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics - October 20, 2019 Category: Genetics & Stem Cells Source Type: research

Identification, genomic organization and expression pattern of glutathione transferase in Pardosa pseudoannulata
In this study, based on the transcriptome and genome sequencing of P. pseudoannulata, thirteen full-length transcripts encoding GSTs were identified and analyzed. Interestingly, Delta family, which is thought to be specific to the Insecta, was identified in P. pseudoannulata. Further, vertebrate/mammalian-specific Mu family was also identified in P. pseudoannulata. The mRNA expression levels of cytosolic GSTs in different tissues were determined, and most GST genes were abundant in the gut and the fat body. To investigate GST candidates involving in insecticide detoxification, the mRNA levels of cytosolic GSTs were tested ...
Source: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics - September 13, 2019 Category: Genetics & Stem Cells Source Type: research

Proteomics for understanding pathogenesis, immune modulation and host pathogen interactions in aquaculture
Publication date: Available online 11 September 2019Source: Comparative Biochemistry and Physiology Part D: Genomics and ProteomicsAuthor(s): Fatma Ahmed, Gokhlesh Kumar, Faiza M. Soliman, Mohamed A. Adly, Hamdy A.M. Soliman, Mansour El-Matbouli, Mona SalehAbstractProteomic analyses techniques are considered strong tools for identifying and quantifying the protein contents in different organisms, organs and secretions. In fish biotechnology, the proteomic analyses have been used for wide range of applications such as identification of immune related proteins during infections and stresses. The proteomic approach has a sign...
Source: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics - September 11, 2019 Category: Genetics & Stem Cells Source Type: research

Corrigendum to “Transcriptome analysis of shell color-related genes in the hard clam Mercenaria mercenaria” [Comp. Biochem. Physiol. - Part D: Genomics Proteomics/31 (2019)/100598]
Publication date: Available online 23 August 2019Source: Comparative Biochemistry and Physiology Part D: Genomics and ProteomicsAuthor(s): Zhi Hu, Hao Song, Mei-jie Yang, Zheng-lin Yu, Cong Zhou, Xiao-long Wang, Tao Zhang (Source: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics)
Source: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics - August 23, 2019 Category: Genetics & Stem Cells Source Type: research

Editorial Board
Publication date: September 2019Source: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics, Volume 31Author(s): (Source: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics)
Source: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics - August 14, 2019 Category: Genetics & Stem Cells Source Type: research

Publisher's Note
Publication date: September 2019Source: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics, Volume 31Author(s): (Source: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics)
Source: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics - August 14, 2019 Category: Genetics & Stem Cells Source Type: research

Transcriptome analyses reveal alterations in muscle metabolism, immune responses and reproductive behavior of Japanese mantis shrimp (Oratosquilla oratoria) at different cold temperature
Publication date: Available online 5 August 2019Source: Comparative Biochemistry and Physiology Part D: Genomics and ProteomicsAuthor(s): Fangrui Lou, Tianxiang Gao, Zhiqiang HanAbstractLow temperature reduction is thought to cause widespread effects on the physical and behavioral traits of marine organisms, which include metabolic processes, immune responses, and reproductive behavior. Crustaceans are generally considered sensitive to temperature reduction due to the lack of efficient regulators. To better understand the molecular regulatory mechanisms of crustacean exposure to cold stress, Japanese mantis shrimp (Oratosq...
Source: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics - August 7, 2019 Category: Genetics & Stem Cells Source Type: research

Physiological status of silver carp (Hypophthalmichthys molitrix) in the Illinois River: An assessment of fish at the leading edge of the invasion front
Publication date: Available online 29 July 2019Source: Comparative Biochemistry and Physiology Part D: Genomics and ProteomicsAuthor(s): Jennifer D. Jeffrey, Ken M. Jeffries, Cory D. SuskiAbstractSilver carp (Hypophthalmichthys molitrix) are invasive to North America, and their range has expanded within the Mississippi River Basin, seemingly unchecked, since their introduction in the late 1970s, with the exception of the upper reaches of the Illinois River. With the imminent threat of their movement into the Great Lakes, the goal of the present study was to assess whether differences in the physiological status between sil...
Source: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics - July 31, 2019 Category: Genetics & Stem Cells Source Type: research

Environment, endocrinology, and biochemistry influence expression of stress proteins in bottlenose dolphins
This study provides further understanding of the underlying mechanisms of the stress response in bottlenose dolphins and application of a combination of novel methods to measure stress in wildlife.Graphical abstract (Source: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics)
Source: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics - July 28, 2019 Category: Genetics & Stem Cells Source Type: research

Metabolomic changes and polyunsaturated fatty acid biosynthesis during gonadal growth and development in the sea urchin Strongylocentrotus intermedius
In this study, we have histologically observed gonad growth stages, analyzed the fatty acid composition, and employed an untargeted metabolomic approach to investigate the metabolites associated with the gonadal growth and development of S. intermedius, as well as the biosynthesis and metabolism of polyunsaturated fatty acids (PUFAs) at different stages and in different sexes. The gonad mass of sea urchin increased from 0.70 ± 0.18 g in January (at the recovering stage) to 8.78 ± 2.89 g in July (the reproductive stage), with the GSI increasing from 4.02 ± 0.88% to 16.86 ± 2.79%. We have analyzed 34 ...
Source: Comparative Biochemistry and Physiology Part D: Genomics and Proteomics - July 27, 2019 Category: Genetics & Stem Cells Source Type: research