MACMIC Reveals A Dual Role of CTCF in Epigenetic Regulation of Cell Identity Genes
Publication date: Available online 5 March 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Guangyu Wang, Bo Xia, Man Zhou, Jie Lv, Dongyu Zhao, Yanqiang Li, Yiwen Bu, Xin Wang, John P. Cooke, Qi Cao, Min Gyu Lee, Lili Zhang, Kaifu Chen (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 5, 2021 Category: Bioinformatics Source Type: research

Gigantic Genomes Provide Empirical Tests of Transposable Element Dynamics Models
Publication date: Available online 4 March 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Jie Wang, Michael W. Itgen, Huiju Wang, Yuzhou Gong, Jianping Jiang, Jiatang Li, Cheng Sun, Stanley K. Sessions, Rachel Lockridge Mueller (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 4, 2021 Category: Bioinformatics Source Type: research

Npac Is a Co-factor of Histone H3K36me3 and Regulates Transcriptional Elongation in Mouse Embryonic Stem Cells
Publication date: Available online 4 March 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Sue Yu, Jia Li, Guanxu Ji, Zhen Long Ng, Jiamin Siew, Wan Ning Lo, Ying Ye, Yuan Yuan Chew, Yun Chau Long, Wensheng Zhang, Ernesto Guccione, Yuin Han Loh, Zhi-Hong Jiang, Henry Yang, Qiang Wu (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 4, 2021 Category: Bioinformatics Source Type: research

Integrative Proteomic Analysis of Posttranslational Modification in the Inflammatory Response
Publication date: Available online 2 March 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Feiyang Ji, Menghao Zhou, Huihui Zhu, Zhengyi Jiang, Qirui Li, Xiaoxi Ouyang, Yiming Lv, Sainan Zhang, Tian Wu, Lanjuan Li (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 2, 2021 Category: Bioinformatics Source Type: research

Trilineage Sequencing Reveals Complex TCRβ Transcriptomes in Neutrophils and Monocytes Alongside T Cells
Publication date: Available online 2 March 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Tina Fuchs, Kerstin Puellmann, Chunlin Wang, Jian Han, Alexander W. Beham, Michael Neumaier, Wolfgang E. Kaminski (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 2, 2021 Category: Bioinformatics Source Type: research

CharPlant: A De Novo Open Chromatin Region Prediction Tool for Plant Genomes
Publication date: Available online 2 March 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Yin Shen, Ling-Ling Chen, Junxiang Gao (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 2, 2021 Category: Bioinformatics Source Type: research

Chinese Glioma Genome Atlas (CGGA): A Comprehensive Resource with Functional Genomic Data from Chinese Gliomas
Publication date: Available online 2 March 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Zheng Zhao, Ke-Nan Zhang, Qiangwei Wang, Guanzhang Li, Fan Zeng, Ying Zhang, Fan Wu, Ruichao Chai, Zheng Wang, Chuanbao Zhang, Wei Zhang, Zhaoshi Bao, Tao Jiang (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 2, 2021 Category: Bioinformatics Source Type: research

Quantitative Secretome Analysis Reveals Clinical Values of Carbonic Anhydrase II in Hepatocellular Carcinoma
Publication date: Available online 2 March 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Xiaohua Xing, Hui Yuan, Hongzhi Liu, Xionghong Tan, Bixing Zhao, Yingchao Wang, Jiahe Ouyang, Minjie Lin, Xiaolong Liu, Aimin Huang (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 2, 2021 Category: Bioinformatics Source Type: research

Differential Splicing of Skipped-exons Predicts Drug Response in Cancer Cell Lines
Publication date: Available online 2 March 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Edward Simpson, Steven Chen, Jill L. Reiter, Yunlong Liu (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 2, 2021 Category: Bioinformatics Source Type: research

rMVP: A Memory-efficient, Visualization-enhanced, and Parallel-accelerated tool for Genome-Wide Association Study
Publication date: Available online 2 March 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Lilin Yin, Haohao Zhang, Zhenshuang Tang, Jingya Xu, Dong Yin, Zhiwu Zhang, Xiaohui Yuan, Mengjin Zhu, Shuhong Zhao, Xinyun Li, Xiaolei Liu (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 2, 2021 Category: Bioinformatics Source Type: research

DTFLOW: Inference and Visualization of Single-cell Pseudotime Trajectory Using Diffusion Propagation
Publication date: Available online 2 March 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Jiangyong Wei, Tianshou Zhou, Xinan Zhang, Tianhai Tian (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 2, 2021 Category: Bioinformatics Source Type: research

Direct Comparative Analyses of 10X Genomics Chromium and Smart-seq2
Publication date: Available online 2 March 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Xiliang Wang, Yao He, Qiming Zhang, Xianwen Ren, Zemin Zhang (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 2, 2021 Category: Bioinformatics Source Type: research

DeeReCT-APA: Prediction of Alternative Polyadenylation Site Usage Through Deep Learning
Publication date: Available online 2 March 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Zhongxiao Li, Yisheng Li, Bin Zhang, Yu Li, Yongkang Long, Juexiao Zhou, Xudong Zou, Min Zhang, Yuhui Hu, Wei Chen, Xin Gao (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 2, 2021 Category: Bioinformatics Source Type: research

Structural and Functional Analyses of Hub MicroRNAs in an Integrated Gene Regulatory Network of Arabidopsis
Publication date: Available online 2 March 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Zhaoxu Gao, Jun Li, Li Li, Yanzhi Yang, Jian Li, Chunxiang Fu, Danmeng Zhu, Hang He, Huaqing Cai, Lei Li (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 2, 2021 Category: Bioinformatics Source Type: research

Robust Benchmark Structural Variant Calls of An Asian Using the State-of-art Long Fragment Sequencing Technologies
Publication date: Available online 2 March 2021Source: Genomics, Proteomics & BioinformaticsAuthor(s): Xiao Du, Lili Li, Fan Liang, Sanyang Liu, Wenxin Zhang, Shuai Sun, Yuhui Sun, Fei Fan, Linying Wang, Xinming Liang, Weijin Qiu, Guangyi Fan, Ou Wang, Weifei Yang, Jiezhong Zhang, Yuhui Xiao, Yang Wang, Depeng Wang, Shoufang Qu, Fang Chen (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 2, 2021 Category: Bioinformatics Source Type: research