SinoDuplex: An Improved Duplex Sequencing Approach to Detect Low-frequency Variants in Plasma cfDNA Samples
Publication date: Available online 16 May 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Yongzhe Ren, Yang Zhang, Dandan Wang, Fengying Liu, Ying Fu, Shaohua Xiang, Li Su, Jiancheng Li, Heng Dai, Bingding Huang (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - May 18, 2020 Category: Bioinformatics Source Type: research

The Birth of Bio-data Science: Trends, Expectations, and Applications
Publication date: Available online 16 May 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Wilson Wen Bin Goh, Limsoon Wong (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - May 16, 2020 Category: Bioinformatics Source Type: research

Procleave: Predicting Protease-specific Substrate Cleavage Sites by Combining Sequence and Structural Information
Publication date: Available online 12 May 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Fuyi Li, Andre Leier, Quanzhong Liu, Yanan Wang, Dongxu Xiang, Tatsuya Akutsu, Geoffrey I. Webb, A. Ian Smith, Tatiana Marquez-Lago, Jian Li, Jiangning Song (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - May 13, 2020 Category: Bioinformatics Source Type: research

CRISPR Screens Identify Essential Cell Growth Mediators in BRAF Inhibitor-resistant Melanoma
Publication date: Available online 13 May 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Ziyi Li, Binbin Wang, Shengqing Gu, Peng Jiang, Avinash Sahu, Chen-Hao Chen, Tong Han, Sailing Shi, Xiaoqing Wang, Nicole Traugh, Hailing Liu, Yin Liu, Qiu Wu, Myles Brown, Tengfei Xiao, Genevieve M. Boland, X. Shirley Liu (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - May 13, 2020 Category: Bioinformatics Source Type: research

The Elements of Data Sharing
Publication date: Available online 28 April 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Zhang Zhang, Shuhui Song, Jun Yu, Wenming Zhao, Jingfa Xiao, Yiming Bao (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - April 29, 2020 Category: Bioinformatics Source Type: research

Tung Tree (Vernicia fordii) Genome Provides A Resource for Understanding Genome Evolution and Improved Oil Production
Publication date: Available online 26 March 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Lin Zhang, Meilan Liu, Hongxu Long, Wei Dong, Asher Pasha, Eddi Esteban, Wenying Li, Xiaoming Yang, Ze Li, Aixia Song, Duo Ran, Guang Zhao, Yanling Zeng, Hao Chen, Ming Zou, Jingjing Li, Fan Liang, Meili Xie, Jiang Hu, Depeng Wang (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 27, 2020 Category: Bioinformatics Source Type: research

Multi-omics Analysis of Primary Cell Culture Models Reveals Genetic and Epigenetic Basis of Intratumoral Phenotypic Diversity
Publication date: Available online 20 March 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Sixue Liu, Zuyu Yang, Guanghao Li, Chunyan Li, Yanting Luo, Qiang Gong, Xin Wu, Tao Li, Zhiqian Zhang, Baocai Xing, Xiaolan Xu, Xuemei Lu (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 21, 2020 Category: Bioinformatics Source Type: research

GPS 5.0: An Update on the Prediction of Kinase-specific Phosphorylation Sites in Proteins
Publication date: Available online 19 March 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Chenwei Wang, Haodong Xu, Shaofeng Lin, W.un Deng, Jiaqi Zhou, Ying Zhang, Ying Shi, Di Peng, Yu Xue (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 19, 2020 Category: Bioinformatics Source Type: research

Intriguing Origins of Protein Lysine Methylation: Influencing Cell Function Through Dynamic Methylation
Publication date: Available online 17 March 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Natalie Mezey, William C.S. Cho, Kyle K. Biggar (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 19, 2020 Category: Bioinformatics Source Type: research

Large-scale Identification and Time-course Quantification of Ubiquitylation Events During Maize Seedling De-etiolation
Publication date: Available online 14 March 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Yue-Feng Wang, Qing Chao, Zhe Li, Tian-Cong Lu, Hai-Yan Zheng, Cai-Feng Zhao, Zhuo Shen, Xiao-Hui Li, Bai-Chen Wang (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 14, 2020 Category: Bioinformatics Source Type: research

SPOT-Disorder2: Improved Protein Intrinsic Disorder Prediction by Ensembled Deep Learning
Publication date: Available online 13 March 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Jack Hanson, Kuldip K. Paliwal, Thomas Litfin, Yaoqi Zhou (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 13, 2020 Category: Bioinformatics Source Type: research

A Computational Approach for Modeling the Allele Frequency Spectrum of Populations with Arbitrarily Varying Size
Publication date: Available online 13 March 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Hua Chen (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 13, 2020 Category: Bioinformatics Source Type: research

Meta-analysis Reveals Potential Influence of Oxidative Stress on the Airway Microbiomes of Cystic Fibrosis Patients
Publication date: Available online 12 March 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Xing Shi, Zhancheng Gao, Qiang Lin, Liping Zhao, Qin Ma, Yu Kang, Jun Yu (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 13, 2020 Category: Bioinformatics Source Type: research

MSIsensor-pro: Fast, Accurate, and Matched-normal-sample-free Detection of Microsatellite Instability
Publication date: Available online 12 March 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Peng Jia, Xiaofei Yang, Li Guo, Bowen Liu, Jiadong Lin, Hao Liang, Jianyong Sun, Chengsheng Zhang, Kai Ye (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 13, 2020 Category: Bioinformatics Source Type: research

Epitranscriptomic 5-Methylcytosine Profile in PM2.5-induced Mouse Pulmonary Fibrosis
Publication date: Available online 3 March 2020Source: Genomics, Proteomics & BioinformaticsAuthor(s): Xiao Han, Hanchen Liu, Zezhong Zhang, Wenlan Yang, Chunyan Wu, Xueying Liu, Fang Zhang, Baofa Sun, Yongliang Zhao, Guibin Jiang, Yun-Gui Yang, Wenjun Ding (Source: Genomics, Proteomics and Bioinformatics)
Source: Genomics, Proteomics and Bioinformatics - March 4, 2020 Category: Bioinformatics Source Type: research