A novel bioengineered fragment peptide of Vasostatin-1 exerts smooth muscle pharmacological activities and anti-angiogenic effects via blocking VEGFR signalling pathway
Publication date: Available online 3 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Ran Wei, Qiushuang Wu, Nana Ai, Lei Wang, Mei Zhou, Chris Shaw, Tianbao Chen, Richard Dequan Ye, Wei Ge, Shirley W.I. Siu, Hang Fai Kwok (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 4, 2021 Category: Biotechnology Source Type: research

Comparison of the pH- and thermally-induced fluctuations of a therapeutic antibody Fab fragment by molecular dynamics simulation
Publication date: Available online 4 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Cheng Zhang, Nuria Codina, Jiazhi Tang, Haoran Yu, Nesrine Chakroun, Frank Kozielski, Paul A. Dalby (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 4, 2021 Category: Biotechnology Source Type: research

Evidence of a Putative Glycosaminoglycan Binding Site on the Glycosylated SARS-CoV-2 Spike Protein N-terminal domain
Publication date: Available online 4 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Zachariah P. Schuurs, Edward Hammond, Stefano Elli, Timothy R. Rudd, Courtney J. Mycroft-West, Marcelo A. Lima, Mark A. Skidmore, Richard Karlsson, Yen-Hsi Chen, Ieva Bagdonaite, Zhang Yang, Yassir A Ahmed, Derek J. Richard, Jeremy Turnbul, Vito Ferro, Deirdre R. Coombe, Neha S. Gandhi (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 4, 2021 Category: Biotechnology Source Type: research

Refinement of bamboo genome annotations through integrative analyses of transcriptomic and epigenomic data
Publication date: Available online 30 April 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Xuelian Ma, Hansheng Zhao, Hengyu Yan, Minghao Sheng, Yaxin Cao, Kebin Yang, Hao Xu, Wenying Xu, Zhimin Gao, Zhen Su (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 1, 2021 Category: Biotechnology Source Type: research

Spatial heterogeneity analysis of the human virome with taylor’s power law
Publication date: Available online 30 April 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Zhanshan Sam Ma (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 1, 2021 Category: Biotechnology Source Type: research

Deepomix: a multi-omics scalable and interpretable deep learning framework and application in cancer survival analysis
Publication date: Available online 1 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Lianhe Zhao, Qiongye Dong, Chunlong Luo, Yang Wu, Dechao Bu, Xiaoning Qi, Yufan Luo, Yi Zhao (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 1, 2021 Category: Biotechnology Source Type: research

Clinical evaluation of SARS-CoV-2 Lung HRCT and RT-PCR Techniques: Towards risk factor based diagnosis of infectious diseases
Publication date: Available online 30 April 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Fariba Asadi, Razieh Shahnazari, Nikhil Bhalla, Amir Farokh Payam (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - April 30, 2021 Category: Biotechnology Source Type: research

Recognition of a Tandem Lesion by DNA bacterial formamidopyrimidine Glycosylases Explored Combining Molecular Dynamics and Machine Learning
Publication date: Available online 30 April 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Emmanuelle Bignon, Natacha Gillet, Chen-Hui Chan, Tao Jiang, Antonio Monari, Elise Dumont (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - April 30, 2021 Category: Biotechnology Source Type: research

Improved cluster ranking in protein–protein docking using a regression approach
Publication date: 2021Source: Computational and Structural Biotechnology Journal, Volume 19Author(s): Shahabeddin Sotudian, Israel T. Desta, Nasser Hashemi, Shahrooz Zarbafian, Dima Kozakov, Pirooz Vakili, Sandor Vajda, Ioannis Ch. Paschalidis (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - April 29, 2021 Category: Biotechnology Source Type: research

Representations of protein structure for exploring the conformational space: a speed–accuracy trade-off
Publication date: Available online 28 April 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Guillaume Postic, Nathalie Janel, Gautier Moroy (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - April 29, 2021 Category: Biotechnology Source Type: research

Machine learning reveals hidden stability code in protein native fluorescence
Publication date: Available online 28 April 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Hongyu Zhang, Yang Yang, Cheng Zhang, Suzanne S. Farid, Paul A. Dalby (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - April 29, 2021 Category: Biotechnology Source Type: research

Towards multi-label classification: next step of machine learning for microbiome research
Publication date: Available online 28 April 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Shunyao Wu, Yuzhu Chen, Zhiruo Li, Jian Li, Fengyang Zhao, Xiaoquan Su (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - April 29, 2021 Category: Biotechnology Source Type: research

Computational strategies for single-cell multi-omics integration
Publication date: Available online 27 April 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Nigatu Adossa, Sofia Khan, Kalle T. Rytkönen, Laura L. Elo (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - April 28, 2021 Category: Biotechnology Source Type: research

HCMB: A stable and efficient algorithm for processing the normalization of highly sparse Hi-C contact data
Publication date: Available online 27 April 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Honglong Wu, Xuebin Wang, Mengtian Chu, Dongfang Li, Lixin Cheng, Ke Zhou (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - April 28, 2021 Category: Biotechnology Source Type: research

Interplay between miRNAs and lncRNAs: mode of action and biological roles in plant development and stress adaptation
Publication date: Available online 27 April 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Xiangxiang Meng, Aixia Li, Bin Yu, Shengjun Li (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - April 28, 2021 Category: Biotechnology Source Type: research