Scaffold fragmentation and substructure hopping reveal potential, robustness, and limits of computer-aided pattern analysis (C@PA)
Publication date: Available online 10 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Vigneshwaran Namasivayam, Katja Silbermann, Jens Pahnke, Michael Wiese, Sven Marcel Stefan (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 12, 2021 Category: Biotechnology Source Type: research

Gut lactate-producing Bacteria Promote CD4 T Cell Recovery on Anti-retroviral Therapy in HIV-infected Patients
Publication date: Available online 11 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Wei Lyu, Qingren Meng, Jingfa Xiao, Jing Li, Jian Wang, Zhifeng Qiu, Xiaojing Song, Hua Zhu, Changjun Shao, Yanan Chu, Qian Zhou, Taisheng Li, Routy Jean-Pierre, Jun Yu, Yang Han, Yu Kang (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 12, 2021 Category: Biotechnology Source Type: research

Amino Acid Residue at the 165th Position Tunes Eyfp Chromophore Maturation. A Structure-Based Design
Publication date: Available online 11 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Nadya V. Pletneva, Eugene G. Maksimov, Elena A. Protasova, Anastasia V. Mamontova, Tatiana R. Simonyan, Rustam H. Ziganshin, Konstantin A. Lukyanov, Liya Muslinkina, Sergei Pletnev, Alexey M. Bogdanov, Vladimir Z. Pletnev (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 12, 2021 Category: Biotechnology Source Type: research

The disGeNET cytoscape app: exploring and visualizing disease genomics data
Publication date: Available online 11 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Janet Piñero, Josep Saüch, Ferran Sanz, Laura I. Furlong (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 12, 2021 Category: Biotechnology Source Type: research

In silico trio-biomarkers for bacterial vaginosis revealed by species dominance network analysis
Publication date: Available online 11 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Zhanshan Sam Ma, Aaron M. Ellison (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 12, 2021 Category: Biotechnology Source Type: research

PredTAD: A machine learning framework that models 3D chromatin organization alterations leading to oncogene dysregulation in breast cancer cell lines
Publication date: Available online 7 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Jacqueline Chyr, Zhigang Zhang, Xi Chen, Xiaobo Zhou (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 9, 2021 Category: Biotechnology Source Type: research

Substantial cell apoptosis provoked by Naked PAMAM Dendrimers in HER2-positive human breast cancer via JNK and ERK1/ERK2 signalling pathways
Publication date: Available online 7 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Hadeel Kheraldine, Ishita Gupta, Hashim Alhussain, Aayesha Jabeen, Farhan S. Cyprian, Saghir Akhtar, Ala-Eddin Al Moustafa, Ousama Rachid (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 9, 2021 Category: Biotechnology Source Type: research

RiboDoc: a Docker-based package for ribosome profiling analysis
Publication date: Available online 7 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Pauline François, Hugo Arbes, Stéphane Demais, Agnès Baudin-Baillieu, Olivier Namy (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 9, 2021 Category: Biotechnology Source Type: research

The repertoire of ABC proteins in Clostridioides difficile
Publication date: Available online 8 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Methinee Pipatthana, Phurt Harnvoravongchai, Pisut Pongchaikul, Somsak Likhitrattanapisal, Matthew Phanchana, Surang Chankhamhaengdecha, Tavan Janvilisri (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 9, 2021 Category: Biotechnology Source Type: research

Artificial Intelligence in clinical care amidst COVID-19 Pandemic: A Systematic Review
Publication date: Available online 7 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Eleni S. Adamidi, Konstantinos Mitsis, Konstantina S. Nikita (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 7, 2021 Category: Biotechnology Source Type: research

Endogenous Modulators of Neurotrophin Signaling: Landscape of the Transient ATP- NGF Interactions
Publication date: Available online 7 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Francesca Paoletti, Franci Merzel, Alberto Cassetta, Iza Ogris, Sonia Covaceuszach, Jože Grdadolnik, Doriano Lamba, Simona Golič Grdadolnik (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 7, 2021 Category: Biotechnology Source Type: research

Network analysis methods for studying microbial communities: A mini review
Publication date: Available online 4 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Monica Steffi Matchado, Michael Lauber, Sandra Reitmeier, Tim Kacprowski, Jan Baumbach, Dirk Haller, Markus List (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 5, 2021 Category: Biotechnology Source Type: research

Bacterial extracellular matrix as a natural source of biotechnologically multivalent materials
Publication date: Available online 5 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Carlos Molina-Santiago, Antonio de Vicente, Diego Romero (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 5, 2021 Category: Biotechnology Source Type: research

Super-enhancer-mediated core regulatory circuitry in human cancer
Publication date: Available online 5 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): Yuan Jiang, Yan-Yi Jiang, De-Chen Lin (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 5, 2021 Category: Biotechnology Source Type: research

Phylogenetic, functional and structural characterization of a GH10 xylanase active at extreme conditions of temperature and alkalinity
Publication date: Available online 3 May 2021Source: Computational and Structural Biotechnology JournalAuthor(s): David Talens-Perales, Elena Jiménez-Ortega, Paloma Sánchez-Torres, Julia Sanz-Aparicio, Julio Polaina (Source: Computational and Structural Biotechnology Journal)
Source: Computational and Structural Biotechnology Journal - May 4, 2021 Category: Biotechnology Source Type: research