Drawing and Editing the Secondary Structure(s) of RNA

We describe the file formats and structural descriptions accepted by popular RNA visualization tools. We also provide command lines and Python scripts to ease the user’s access to advanced features. Finally, we discuss and illustrate alternative approaches to visualize the secondary structure in the presence of probing data, pseudoknots, RNA–RNA interactions, and comparative data.

Source: Springer protocols feed by Bioinformatics - January 1, 2015 Category: Bioinformatics Source Type: news