RNA secondary structure analysis using the RNAshapes package.

RNA secondary structure analysis using the RNAshapes package.
Curr Protoc Bioinformatics. 2009 Jun;Chapter 12:Unit12.8
Authors: Reeder J, Giegerich R
Abstract
This unit shows how to use the RNAshapes package for the prediction of the secondary structure of a single RNA sequence using either minimum free energy methods or weighted ensemble information. It also includes a protocol for the consensus prediction of a set of related sequences.
PMID: 19496058 [PubMed - indexed for MEDLINE]

Source: Current Protocols in Bioinformatics - November 12, 2014 Category: Bioinformatics Tags: Curr Protoc Bioinformatics Source Type: research