Analyzing shotgun proteomic data with PatternLab for proteomics.

Analyzing shotgun proteomic data with PatternLab for proteomics. Curr Protoc Bioinformatics. 2010 Jun;Chapter 13:Unit 13.13.1-15 Authors: Carvalho PC, Yates Iii JR, Barbosa VC Abstract PatternLab for proteomics is a one-stop shop computational environment for analyzing shotgun proteomic data. Its modules provide means to pinpoint proteins/peptides that are differentially expressed and those that are unique to a state. It can also cluster the ones that share similar expression profiles in time-course experiments, as well as help in interpreting results according to Gene Ontology. PatternLab is user-friendly, simple, and provides a graphical user interface. PMID: 20521246 [PubMed - indexed for MEDLINE]
Source: Current Protocols in Bioinformatics - Category: Bioinformatics Tags: Curr Protoc Bioinformatics Source Type: research