RNA sequencing analysis of gene expression regulated by the transcription factor SlZFP2 during early fruit development

Publication date: Available online 10 March 2016 Source:Genomics Data Author(s): Lin Weng, Fangfang Zhao, Rong Li, Han Xiao [Briefly describe the contents of the Data in Brief article. Tell the reader the repository and reference number for the data in the abstract to.] The transcription factor SlZFP2 (Solanum lycopersicum Zinc Finger Protein 2) regulates ABA biosynthesis during fruit development. To reveal the regulatory network of this transcription factor, we conducted a high-throughput RNA-seq to identify differentially expressed genes in 2 dpa (days post anthesis) fruits from a representative RNAi line in S.piminellifolium LA1589 background and the wild type. The transcriptome analysis revealed that expression of 2722 genes was regulated by SlZFP2 during early fruit development and further helped to narrow down its direct targets to 193 genes. Here, we provide a detailed description of the experimental procedure associated with our transcriptome sequencing data deposited in the National Center for Biotechnology Information (accession no. GSE63838).
Source: Genomics Data - Category: Genetics & Stem Cells Source Type: research